Medical/COVID-19: Difference between revisions

Revision as of 15:11, 21 April 2020

This page is Fedora Medical SIG's COVID-19 page.

The COVID-19 is of many people's interest. So, this page is created for people who want to contribute or do RPM packaging.

We list up the COVID-19 focusing projects. This is a a top-down approach to find the areas.

We list up the projects used in the COVID-19. This is a bottom-up approach to find the areas.

@@ Line 10: / Line 10: @@
 * [https://www.codevscovid19.org/ CodeVsCovid19]
+* [https://covid19.galaxyproject.org/ COVID-19 analysis on using galaxy]: [https://github.com/galaxyproject/SARS-CoV-2 GitHub]
+* [https://github.com/CDCgov/SARS-CoV-2_Sequencing SARS-CoV-2 Sequencing Resources]
 * [https://cbg-ethz.github.io/V-pipe/sars-cov-2/ V-pipe SARS-CoV-2]
 * [https://fevermap.net/ fevermap]: [https://gitlab.com/fevermap/fevermap Source]
@@ Line 22: / Line 25: @@
 * [https://blends.debian.org/med/tasks/covid-19 Debian Med COVID-19 packages]
 * [https://bio.tools/t?domain=covid-19 Elixir bio.tools COVID-19 Coronavirus tools list]
 * nf-core
 ** [https://nf-co.re/nanoseq nf-core/nanoseq]
 ** [https://nf-co.re/artic nf-core/artic]
 ** [https://nf-co.re/viralrecon nf-core/viralrecon]
+** single-cell analysis
+*** [https://nf-co.re/scrnaseq nf-core/scrnaseq]
+*** [https://nf-co.re/smartseq2 nf-core/smartseq2]
 == Hardware projects ==